All Publications by Zackary Johnson

Gong, Y., T. Bandara, M. Huntley, Z. I. Johnson, J. Dias, D. Dahle, M. Sørensen, and V. Kiron. “Microalgae Scenedesmus sp. as a potential ingredient in low fishmeal diets for Atlantic salmon (Salmo salar L.).” Aquaculture 501 (February 25, 2019): 455–64. https://doi.org/10.1016/j.aquaculture.2018.11.049.
Hogle, Shane L., Christopher L. Dupont, Brian M. Hopkinson, Andrew L. King, Kristen N. Buck, Kelly L. Roe, Rhona K. Stuart, et al. “Pervasive iron limitation at subsurface chlorophyll maxima of the California Current..” Proceedings of the National Academy of Sciences of the United States of America 115, no. 52 (December 10, 2018): 13300–305. https://doi.org/10.1073/pnas.1813192115.
Duan, Yingbo, Ningdong Xie, Zhiquan Song, Christopher S. Ward, Cheuk-Man Yung, Dana E. Hunt, Zackary I. Johnson, and Guangyi Wang. “A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA)..” Applied and Environmental Microbiology 84, no. 21 (November 2018). https://doi.org/10.1128/AEM.00967-18.
Xie, Ningdong, Biswarup Sen, Zhiquan Song, Yue Zhao, Zixi Chen, Weijie Shi, Yongfeng Zhang, Jianle Zhang, Zackary I. Johnson, and Guangyi Wang. “High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea..” Environmental Microbiology 20, no. 8 (August 30, 2018): 3042–56. https://doi.org/10.1111/1462-2920.14341.
Beal, C. M., I. Archibald, M. E. Huntley, C. H. Greene, and Z. I. Johnson. “Integrating Algae with Bioenergy Carbon Capture and Storage (ABECCS) Increases Sustainability.” Earth’S Future 6, no. 3 (March 1, 2018): 524–42. https://doi.org/10.1002/2017EF000704.
Prairie, Jennifer C., Kai Ziervogel, Roberto Camassa, Richard M. McLaughlin, Brian L. White, Zackary I. Johnson, and Carol Arnosti. “Ephemeral aggregate layers in the water column leave lasting footprints in the carbon cycle.” Limnology and Oceanography Letters 2, no. 6 (December 2017): 202–9. https://doi.org/10.1002/lol2.10053.
He, Yaodong, Biswarup Sen, Junyang Shang, Yike He, Ningdong Xie, Yongfeng Zhang, Jianle Zhang, Zackary I. Johnson, and Guangyi Wang. “Seasonal influence of scallop culture on nutrient flux, bacterial pathogens and bacterioplankton diversity across estuaries off the Bohai Sea Coast of Northern China..” Marine Pollution Bulletin 124, no. 1 (November 2017): 411–20. https://doi.org/10.1016/j.marpolbul.2017.07.062.
Ma, Lanying, Benjamin C. Calfee, J Jeffrey Morris, Zackary I. Johnson, and Erik R. Zinser. “Degradation of hydrogen peroxide at the ocean's surface: the influence of the microbial community on the realized thermal niche of Prochlorococcus..” The Isme Journal, October 31, 2017. https://doi.org/10.1038/ismej.2017.182.
Cohen, N. R., K. A. Ellis, W. G. Burns, R. H. Lampe, N. Schuback, Z. Johnson, S. Sañudo-Wilhelmy, and A. Marchetti. “Iron and vitamin interactions in marine diatom isolates and natural assemblages of the Northeast Pacific Ocean.” Limnology and Oceanography 62, no. 5 (September 1, 2017): 2076–96. https://doi.org/10.1002/lno.10552.
Liu, Ying, Purnima Singh, Yuanmei Liang, Jingjing Li, Ningdong Xie, Zhiquan Song, Maurycy Daroch, Keming Leng, Zackary I. Johnson, and Guangyi Wang. “Abundance and molecular diversity of thraustochytrids in coastal waters of southern China..” Fems Microbiology Ecology 93, no. 6 (June 2017). https://doi.org/10.1093/femsec/fix070.
Loftus, S. E., and Z. I. Johnson. “Cross-study analysis of factors affecting algae cultivation in recycled medium for biofuel production.” Algal Research 24 (June 1, 2017): 154–66. https://doi.org/10.1016/j.algal.2017.03.007.
Ward, Christopher S., Cheuk-Man Yung, Katherine M. Davis, Sara K. Blinebry, Tiffany C. Williams, Zackary I. Johnson, and Dana E. Hunt. “Annual community patterns are driven by seasonal switching between closely related marine bacteria..” The Isme Journal 11, no. 6 (June 2017): 1412–22. https://doi.org/10.1038/ismej.2017.4.
Gainer, P Jackson, Helena L. Pound, Alyse A. Larkin, Gary R. LeCleir, Jennifer M. DeBruyn, Erik R. Zinser, Zackary I. Johnson, and Steven W. Wilhelm. “Contrasting seasonal drivers of virus abundance and production in the North Pacific Ocean..” Plos One 12, no. 9 (January 2017). https://doi.org/10.1371/journal.pone.0184371.
Greene, C. H., M. E. Huntley, I. Archibald, L. N. Gerber, D. L. Sills, J. Granados, J. W. Tester, et al. “Marine microalgae: Climate, energy, and food security from the sea.” Oceanography 29, no. 4 (December 1, 2016): 10–15. https://doi.org/10.5670/oceanog.2016.91.
Walsh, M. J., L. Gerber Van Doren, D. L. Sills, I. Archibald, C. M. Beal, X. G. Lei, M. E. Huntley, Z. Johnson, and C. H. Greene. “Algal food and fuel coproduction can mitigate greenhouse gas emissions while improving land and water-use efficiency.” Environmental Research Letters 11, no. 11 (October 28, 2016). https://doi.org/10.1088/1748-9326/11/11/114006.
Larkin, Alyse A., Sara K. Blinebry, Caroline Howes, Yajuan Lin, Sarah E. Loftus, Carrie A. Schmaus, Erik R. Zinser, and Zackary I. Johnson. “Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific..” The Isme Journal 10, no. 7 (July 2016): 1555–67. https://doi.org/10.1038/ismej.2015.244.
McMurray, S. E., Z. I. Johnson, D. E. Hunt, J. R. Pawlik, and C. M. Finelli. “Selective feeding by the giant barrel sponge enhances foraging efficiency.” Limnology and Oceanography 61, no. 4 (July 1, 2016): 1271–86. https://doi.org/10.1002/lno.10287.
Yung, Cheuk-Man, Christopher S. Ward, Katherine M. Davis, Zackary I. Johnson, and Dana E. Hunt. “Insensitivity of Diverse and Temporally Variable Particle-Associated Microbial Communities to Bulk Seawater Environmental Parameters..” Applied and Environmental Microbiology 82, no. 11 (June 2016): 3431–37. https://doi.org/10.1128/AEM.00395-16.
Chandler, Jeremy W., Yajuan Lin, P Jackson Gainer, Anton F. Post, Zackary I. Johnson, and Erik R. Zinser. “Variable but persistent coexistence of Prochlorococcus ecotypes along temperature gradients in the ocean's surface mixed layer..” Environmental Microbiology Reports 8, no. 2 (April 2016): 272–84. https://doi.org/10.1111/1758-2229.12378.
Morris, J. J., Z. I. Johnson, S. W. Wilhelm, and E. R. Zinser. “Diel regulation of hydrogen peroxide defenses by open ocean microbial communities.” Journal of Plankton Research 38, no. 4 (January 1, 2016): 1103–14. https://doi.org/10.1093/plankt/fbw016.
Yung, Cheuk-Man, Marissa K. Vereen, Amy Herbert, Katherine M. Davis, Jiayu Yang, Agata Kantorowska, Christopher S. Ward, Jennifer J. Wernegreen, Zackary I. Johnson, and Dana E. Hunt. “Thermally adaptive tradeoffs in closely related marine bacterial strains..” Environmental Microbiology 17, no. 7 (July 2015): 2421–29. https://doi.org/10.1111/1462-2920.12714.
Ribalet, Francois, Jarred Swalwell, Sophie Clayton, Valeria Jiménez, Sebastian Sudek, Yajuan Lin, Zackary I. Johnson, Alexandra Z. Worden, and E Virginia Armbrust. “Light-driven synchrony of Prochlorococcus growth and mortality in the subtropical Pacific gyre..” Proceedings of the National Academy of Sciences of the United States of America 112, no. 26 (June 15, 2015): 8008–12. https://doi.org/10.1073/pnas.1424279112.
Dupont, Chris L., John P. McCrow, Ruben Valas, Ahmed Moustafa, Nathan Walworth, Ursula Goodenough, Robyn Roth, et al. “Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities..” The Isme Journal 9, no. 5 (May 2015): 1076–92. https://doi.org/10.1038/ismej.2014.198.
Huntley, M. E., Z. I. Johnson, S. L. Brown, D. L. Sills, L. Gerber, I. Archibald, S. C. Machesky, J. Granados, C. Beal, and C. H. Greene. “Corrigendum to "Demonstrated large-scale production of marine microalgae for fuels and feed" [Algal Res. 10 (July 2015) 249-265] DOI: 10.1016/j.algal.2015.04.016.” Algal Research 11 (January 1, 2015): 379–80. https://doi.org/10.1016/j.algal.2015.06.012.
Johnson, Zackary I., and Adam C. Martiny. “Techniques for quantifying phytoplankton biodiversity..” Annual Review of Marine Science 7 (January 2015): 299–324. https://doi.org/10.1146/annurev-marine-010814-015902.
Huntley, M. E., Z. I. Johnson, S. L. Brown, D. L. Sills, L. Gerber, I. Archibald, S. C. Machesky, J. Granados, C. Beal, and C. H. Greene. “Corrigendum to "Demonstrated large-scale production of marine microalgae for fuels and feed" [Algal Res. 10 (July 2015) 249-265] DOI: 10.1016/j.algal.2015.04.016.” Algal Research 11 (2015): 379–80. https://doi.org/10.1016/j.algal.2015.06.012.
Yates, K. K., C. Turley, B. M. Hopkinson, A. E. Todgham, J. N. Cross, H. Greening, P. Williamson, R. Van Hooidonk, D. D. Deheyn, and Z. Johnson. “Transdisciplinary science a path to understanding the interactions among ocean  acidification, ecosystems, and society.” Oceanography 28, no. 2 (January 1, 2015): 212–25. https://doi.org/10.5670/oceanog.2015.43.
Kopf, Anna, Mesude Bicak, Renzo Kottmann, Julia Schnetzer, Ivaylo Kostadinov, Katja Lehmann, Antonio Fernandez-Guerra, et al. “The ocean sampling day consortium..” Gigascience 4 (January 2015). https://doi.org/10.1186/s13742-015-0066-5.
Huntley, M. E., Z. I. Johnson, S. L. Brown, D. L. Sills, L. Gerber, I. Archibald, S. C. Machesky, J. Granados, C. Beal, and C. H. Greene. “Demonstrated large-scale production of marine microalgae for fuels and feed.” Algal Research 10 (January 1, 2015): 249–65. https://doi.org/10.1016/j.algal.2015.04.016.
Jiao, N., T. Luo, R. Zhang, W. Yan, Y. Lin, Z. I. Johnson, J. Tian, et al. “Presence of Prochlorococcus in the aphotic waters of the western Pacific Ocean.” Biogeosciences 11, no. 8 (April 29, 2014): 2391–2400. https://doi.org/10.5194/bg-11-2391-2014.

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